| Element | Missed Instructions | Cov. | Missed Branches | Cov. | Missed | Cxty | Missed | Lines | Missed | Methods |
| Total | 33 of 387 | 91% | 10 of 40 | 75% | 11 | 31 | 10 | 105 | 2 | 11 |
| writeToStream(Writer) | 92% | 75% | 3 | 9 | 2 | 41 | 0 | 1 | ||
| readSequence(LinePushBackReader) | 94% | 80% | 4 | 11 | 2 | 35 | 0 | 1 | ||
| getHeaderBaseCount(String) | 76% | 50% | 2 | 3 | 4 | 10 | 0 | 1 | ||
| copy() | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 | ||
| getFormatType() | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 | ||
| EmblStreamSequence(LinePushBackReader) | 100% | n/a | 0 | 1 | 0 | 5 | 0 | 1 | ||
| EmblStreamSequence(Sequence) | 100% | n/a | 0 | 1 | 0 | 4 | 0 | 1 | ||
| EmblStreamSequence(String) | 100% | n/a | 0 | 1 | 0 | 4 | 0 | 1 | ||
| readHeader(LinePushBackReader) | 100% | n/a | 0 | 1 | 0 | 3 | 0 | 1 | ||
| setHeader(String) | 100% | n/a | 0 | 1 | 0 | 2 | 0 | 1 | ||
| getHeader() | 100% | n/a | 0 | 1 | 0 | 1 | 0 | 1 |